Transcript: LINC01733:5

Basic information

LNCipedia transcript ID: LINC01733:5 
LNCipedia gene ID: LINC01733
Location (hg38): chr20:25955817-25969287
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4598 bp
Exons: 4
Sources: Broad Institute
Alternative transcript names: TCONS_00027863
Alternative gene names: XLOC_013502; linc-DEFB115-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 14.5885 non-coding 
CPAT coding probability 1.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01733:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM182A-1:2
3.1 lnc-FAM182A-1:2
4.0 lnc-FAM182A-1:2
4.1 lnc-FAM182A-1:2
5.0 lnc-FAM182A-1:2
5.1 LINC01733:3
5.2 LINC01733:5