Transcript: LINC01732:10

Basic information

LNCipedia transcript ID: LINC01732:10 
HGNC Gene Symbol: LINC01732    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1732
Ensembl Gene ID: ENSG00000237292
Ensembl Transcript ID: ENST00000435023
RefSeq ID: NR_125966
Location (hg38): chr1:181174484-181182208
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 542 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000435023; ENST00000435023.1; RP11-540K16.1-001; OTTHUMT00000085146.1; NONHSAT008288; NR_125966.1
Alternative gene names: ENSG00000237292; RP11-540K16.1; ENSG00000237292.1; OTTHUMG00000035180.1; LINC01732; LOC101928973


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -19.2399 non-coding 
CPAT coding probability 32.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01732:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-IER5-1:2
3.1 lnc-IER5-1:1
4.0 lnc-IER5-1:1
4.1 lnc-IER5-1:1
5.0 lnc-IER5-1:1
5.1 LINC01732:4
5.2 LINC01732:10