Transcript: LINC01728:8

Basic information

LNCipedia transcript ID: LINC01728:8 
LNCipedia gene ID: LINC01728
Location (hg38): chr20:43892519-43895284
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 308 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00028163; NONHSAT079842
Alternative gene names: XLOC_013528; linc-TOX2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -517.8353 non-coding 
CPAT coding probability 0.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01728:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TOX2-1:1
3.1 lnc-TOX2-1:1
4.0 lnc-TOX2-1:1
4.1 lnc-TOX2-1:1
5.0 lnc-TOX2-1:1
5.1 LINC01728:3
5.2 LINC01728:8