Transcript: LINC01714:35

Basic information

LNCipedia transcript ID: LINC01714:35 
HGNC Gene Symbol: LINC01714    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1714
Ensembl Gene ID: ENSG00000227634
Ensembl Transcript ID: ENST00000635451
Location (hg38): chr1:8202429-8215210
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 896 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000635451.1
Alternative gene names: ENSG00000227634.2; RP11-431K24.3; LINC01714


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -70.2656 non-coding 
CPAT coding probability 10.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01714:35 no no no no

Available literature

  1. Malouf (2015), Characterization of long non-coding RNA transcriptome in clear-cell renal cell carcinoma by next-generation deep sequencing., Mol Oncol


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-SLC45A1-2:3
4.1 lnc-PARK7-1:16
5.0 lnc-PARK7-1:16
5.1 LINC01714:17
5.2 LINC01714:35