Transcript: LINC01714:30

Basic information

LNCipedia transcript ID: LINC01714:30 
LNCipedia gene ID: LINC01714
Location (hg38): chr1:8201369-8202321
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 953 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000238290.1|FTMT20400000332.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -18.1683 non-coding 
CPAT coding probability 0.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01714:30 no no no no

Available literature

  1. Malouf (2015), Characterization of long non-coding RNA transcriptome in clear-cell renal cell carcinoma by next-generation deep sequencing., Mol Oncol


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PARK7-1:11
5.0 lnc-PARK7-1:11
5.1 LINC01714:12
5.2 LINC01714:30