Transcript: LINC01706:6

Basic information

LNCipedia transcript ID: LINC01706:6 
LNCipedia gene ID: LINC01706
Location (hg38): chr20:7347467-7368497
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1613 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00027858; NONHSAT078545
Alternative gene names: XLOC_013453; linc-PLCB1-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -75.5742 non-coding 
CPAT coding probability 2.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01706:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BMP2-3:1
3.1 lnc-BMP2-3:1
4.0 lnc-BMP2-3:1
4.1 lnc-BMP2-3:1
5.0 lnc-BMP2-3:1
5.1 LINC01706:3
5.2 LINC01706:6