Transcript: LINC01697:28

Basic information

LNCipedia transcript ID: LINC01697:28 
HGNC Gene Symbol: LINC01697    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1697
Ensembl Gene ID: ENSG00000232079
Ensembl Transcript ID: ENST00000631186
Location (hg38): chr21:28087142-28102963
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 560 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000631186.1
Alternative gene names: ENSG00000232079.6; AL035610.1; LINC01697


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -38.5166 non-coding 
CPAT coding probability 0.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01697:28 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-USP16-3:13
4.1 lnc-USP16-3:13
5.0 lnc-USP16-3:13
5.1 LINC01697:7
5.2 LINC01697:28