Transcript: LINC01694:21

Basic information

LNCipedia transcript ID: LINC01694:21 
LNCipedia gene ID: LINC01694
Location (hg38): chr21:45593654-45597009
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 674 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: TCONS_00028861; ENST00000441095; ENST00000441095.1; AL133493.2-002; OTTHUMT00000206834.1; NONHSAT082976
Alternative gene names: XLOC_013985; linc-PCBP3; ENSG00000233922; AL133493.2; ENSG00000233922.1; OTTHUMG00000090408.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -58.0212 non-coding 
CPAT coding probability 7.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01694:21 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PCBP3-1:1
3.1 lnc-PCBP3-1:1
4.0 lnc-PCBP3-1:1
4.1 lnc-PCBP3-1:1
5.0 lnc-PCBP3-1:1
5.1 LINC01694:7
5.2 LINC01694:21