Transcript: LINC01678:19

Basic information

LNCipedia transcript ID: LINC01678:19 
LNCipedia gene ID: LINC01678
Location (hg38): chr21:44156574-44159886
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2883 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000225331.1|FTMT28100011028.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 2.5937 non-coding 
CPAT coding probability 49.85% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01678:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ICOSLG-6:19
5.0 lnc-ICOSLG-6:19
5.1 LINC01678:9
5.2 LINC01678:19