Transcript: LINC01678:15

Basic information

LNCipedia transcript ID: LINC01678:15 
LNCipedia gene ID: LINC01678
Location (hg38): chr21:44159015-44160084
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 483 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000225331.1|ENST00000424921.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -0.312 non-coding 
CPAT coding probability 1.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01678:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ICOSLG-6:17
5.0 lnc-ICOSLG-6:17
5.1 LINC01678:5
5.2 LINC01678:15