Transcript: LINC01676:27

Basic information

LNCipedia transcript ID: LINC01676:27 
HGNC Gene Symbol: LINC01676    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1676
Ensembl Gene ID: ENSG00000230768
Ensembl Transcript ID: ENST00000610126
Location (hg38): chr1:105605977-105618935
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 235 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000610126.1
Alternative gene names: ENSG00000230768.3; RP11-251P6.1; ENSG00000230768.7; LINC01676


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01676:27 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AMY1B-3:6
4.0 lnc-AMY1B-3:6
4.1 lnc-AMY1B-3:6
5.0 lnc-AMY1B-3:6
5.1 LINC01676:6
5.2 LINC01676:27