Transcript: LINC01673:7

Basic information

LNCipedia transcript ID: LINC01673:7 
LNCipedia gene ID: LINC01673
Location (hg38): chr21:27638662-27674772
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 585 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00028982; NONHSAT081578
Alternative gene names: XLOC_013896; linc-USP16-9


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -106.4844 non-coding 
CPAT coding probability 1.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01673:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-USP16-7:1
3.1 lnc-USP16-7:1
4.0 lnc-USP16-7:1
4.1 lnc-USP16-7:1
5.0 lnc-USP16-7:1
5.1 LINC01673:3
5.2 LINC01673:7