Transcript: LINC01660:9

Basic information

LNCipedia transcript ID: LINC01660:9 
LNCipedia gene ID: LINC01660
Location (hg38): chr22:18361721-18386597
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3674 bp
Exons: 12
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000577456.1; AC011718.2-004; OTTHUMT00000444810.1
Alternative gene names: ENSG00000223579.2; AC011718.2; OTTHUMG00000150683.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 335.2153 coding 
CPAT coding probability 100.00% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01660:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-USP41-1:2
4.0 lnc-USP41-1:2
4.1 lnc-USP41-1:2
5.0 lnc-USP41-1:2
5.1 LINC01660:3
5.2 LINC01660:9