Transcript: LINC01659:9

Basic information

LNCipedia transcript ID: LINC01659:9 
HGNC Gene Symbol: LINC01659    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1659
Ensembl Gene ID: ENSG00000234928
Ensembl Transcript ID: ENST00000428415
Location (hg38): chr22:23434171-23434731
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 337 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000428415; ENST00000428415.1; AP000344.3-002; OTTHUMT00000319543.1; NONHSAT083885
Alternative gene names: ENSG00000234928; AP000344.3; ENSG00000234928.1; OTTHUMG00000150668.1; LINC01659


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -3.4422 non-coding 
CPAT coding probability 9.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01659:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BCR-2:2
3.1 lnc-BCR-2:2
4.0 lnc-BCR-2:2
4.1 lnc-BCR-2:2
5.0 lnc-BCR-2:2
5.1 LINC01659:5
5.2 LINC01659:9