Transcript: LINC01637:10

Basic information

LNCipedia transcript ID: LINC01637:10 
HGNC Gene Symbol: LINC01637    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1637
Ensembl Gene ID: ENSG00000237476
Ensembl Transcript ID: ENST00000444039
Location (hg38): chr22:20957092-20964679
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 684 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000444039; ENST00000444039.1; XXbac-B135H6.15-001; OTTHUMT00000320156.1; NONHSAT083605
Alternative gene names: ENSG00000237476; XXbac-B135H6.15; ENSG00000237476.1; OTTHUMG00000150805.1; LINC01637


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -84.9842 non-coding 
CPAT coding probability 5.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01637:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AIFM3-1:1
3.1 lnc-AIFM3-1:1
4.0 lnc-AIFM3-1:1
4.1 lnc-AIFM3-1:1
5.0 lnc-AIFM3-1:1
5.1 LINC01637:3
5.2 LINC01637:10