Transcript: LINC01629:10

Basic information

LNCipedia transcript ID: LINC01629:10 
LNCipedia gene ID: LINC01629
Location (hg38): chr14:76959636-76971048
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1621 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000258602.1|MICT00000107765.1
Alternative gene names: linc-KIAA1737-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 12.1599 non-coding 
CPAT coding probability 11.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01629:10 no no no no

Available literature

  1. Lin (2015), The long noncoding RNA landscape in hypoxic and inflammatory renal epithelial injury., Am. J. Physiol. Renal Physiol.
  2. Idogawa (2014), Identification and analysis of large intergenic non-coding RNAs regulated by p53 family members through a genome-wide analysis of p53-binding sites., Hum. Mol. Genet.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC01629:10
5.0 LINC01629:10
5.1 LINC01629:10
5.2 LINC01629:10