Transcript: LINC01616:2

Basic information

LNCipedia transcript ID: LINC01616:2 
LNCipedia gene ID: LINC01616
RefSeq ID: NR_132652
Location (hg38): chr11:29980120-29982393
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2274 bp
Exons: 1
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_132652.1
Alternative gene names: LINC01616


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -86.2758 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01616:2 no no no no

Available literature

  1. Zhou (2015), Identification of Alzheimer's disease-associated long noncoding RNAs., Neurobiol. Aging


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LINC01616:2
5.1 LINC01616:2
5.2 LINC01616:2