Transcript: LINC01614:9

Basic information

LNCipedia transcript ID: LINC01614:9 
LNCipedia gene ID: LINC01614
Location (hg38): chr2:215681323-215683461
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2139 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000237525.2|MICT00000207210.1
Alternative gene names: LCAL4; TCONS_00003105


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -167.0729 non-coding 
CPAT coding probability 0.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01614:9 no no no no

Available literature

  1. White (2014), Transcriptome sequencing reveals altered long intergenic non-coding RNAs in lung cancer., Genome Biol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC01614:9
5.0 LINC01614:9
5.1 LINC01614:9
5.2 LINC01614:9