Transcript: LINC01614:7

Basic information

LNCipedia transcript ID: LINC01614:7 
LNCipedia gene ID: LINC01614
Location (hg38): chr2:215718042-215719424
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 650 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT076777; FPKM1_group_18283_transcript_1
Alternative gene names: LCAL4; TCONS_00003105


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -207.7888 non-coding 
CPAT coding probability 2.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01614:7 no no no no

Available literature

  1. White (2014), Transcriptome sequencing reveals altered long intergenic non-coding RNAs in lung cancer., Genome Biol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM169-3:4
4.0 LINC01614:7
4.1 LINC01614:7
5.0 LINC01614:7
5.1 LINC01614:7
5.2 LINC01614:7