Transcript: LINC01612:4

Basic information

LNCipedia transcript ID: LINC01612:4 
LNCipedia gene ID: LINC01612
Location (hg38): chr4:170226610-170283976
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1494 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT099183
Alternative gene names: RP11-789C1.1; TCONS_00008319


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -162.0009 non-coding 
CPAT coding probability 0.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01612:4 no no no no

Available literature

  1. Song (2016), Identification of differentially expressed signatures of long non-coding RNAs associated with different metastatic potentials in gastric cancer., J. Gastroenterol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CLCN3-4:6
4.0 LINC01612:4
4.1 LINC01612:4
5.0 LINC01612:4
5.1 LINC01612:4
5.2 LINC01612:4