Transcript: LINC01605:20

Basic information

LNCipedia transcript ID: LINC01605:20 
LNCipedia gene ID: LINC01605
Location (hg38): chr8:37403478-37493866
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3663 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000253161.1|MICT00000342029.1
Alternative gene names: TCONS_00014973


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -77.051 non-coding 
CPAT coding probability 13.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01605:20 no no no no

Available literature

  1. Forrest (2018), Colon Cancer-Upregulated Long Non-Coding RNA lincDUSP Regulates Cell Cycle Genes and Potentiates Resistance to Apoptosis., Sci Rep


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC01605:20
5.0 LINC01605:20
5.1 LINC01605:20
5.2 LINC01605:20