Transcript: LINC01585:5

Basic information

LNCipedia transcript ID: LINC01585:5 
HGNC Gene Symbol: LINC01585    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1585
Ensembl Gene ID: ENSG00000245479
Ensembl Transcript ID: ENST00000559473
Location (hg38): chr15:90660739-90664686
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 418 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000559473.1; RP11-387D10.3-002; OTTHUMT00000418072.1; NONHSAT048412
Alternative gene names: ENSG00000245479.2; RP11-387D10.3; OTTHUMG00000172362.1; LINC01585;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -14.9619 non-coding 
CPAT coding probability 1.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01585:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CRTC3-2:4
4.0 LINC01585:5
4.1 LINC01585:5
5.0 LINC01585:5
5.1 LINC01585:5
5.2 LINC01585:5