Transcript: LINC01584:5

Basic information

LNCipedia transcript ID: LINC01584:5 
LNCipedia gene ID: LINC01584
Location (hg38): chr15:86083429-86116717
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 768 bp
Exons: 6
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000563990.1; RP11-553E24.2-001; OTTHUMT00000420984.1
Alternative gene names: ENSG00000260477.1; RP11-553E24.2; OTTHUMG00000172870.1; TCONS_00024001


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -32.2289 non-coding 
CPAT coding probability 7.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01584:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KLHL25-8:5
4.0 LINC01584:5
4.1 LINC01584:5
5.0 LINC01584:5
5.1 LINC01584:5
5.2 LINC01584:5