Transcript: LINC01582:1

Basic information

LNCipedia transcript ID: LINC01582:1 
HGNC Gene Symbol: LINC01582    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1582
Ensembl Gene ID: ENSG00000259611
Ensembl Transcript ID: ENST00000560195
Location (hg38): chr15:98085693-98103712
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 560 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000560195.1; CTD-2544M6.2-001; OTTHUMT00000415588.1; NONHSAT140267
Alternative gene names: ENSG00000259611.1; CTD-2544M6.2; OTTHUMG00000171877.1; LINC01582; TCONS_00023827


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.515 non-coding 
CPAT coding probability 0.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01582:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-82I10.1.1-6:1
4.0 LINC01582:1
4.1 LINC01582:1
5.0 LINC01582:1
5.1 LINC01582:1
5.2 LINC01582:1