Transcript: LINC01581:3

Basic information

LNCipedia transcript ID: LINC01581:3 
HGNC Gene Symbol: LINC01581    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1581
Ensembl Gene ID: ENSG00000259724
Ensembl Transcript ID: ENST00000556357
Location (hg38): chr15:94082896-94099350
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 554 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000556357; ENST00000556357.1; CTD-2643K12.3-002; OTTHUMT00000419518.1; NONHSAT050154
Alternative gene names: ENSG00000258754; CTD-3049M7.1; ENSG00000259724.1; CTD-2643K12.3; OTTHUMG00000172625.1; LINC01581;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -185.1279 non-coding 
CPAT coding probability 1.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01581:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RGMA-6:1
3.1 lnc-RGMA-8:2
4.0 LINC01581:3
4.1 LINC01581:3
5.0 LINC01581:3
5.1 LINC01581:3
5.2 LINC01581:3

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