Transcript: LINC01580:4

Basic information

LNCipedia transcript ID: LINC01580:4 
LNCipedia gene ID: LINC01580
RefSeq ID: NR_120322
Location (hg38): chr15:93900701-93973932
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 771 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT050148; NR_120322; NR_120322.1
Alternative gene names: ; LINC01580


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -66.0189 non-coding 
CPAT coding probability 10.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01580:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MCTP2-4:4
4.0 LINC01580:4
4.1 LINC01580:4
5.0 LINC01580:4
5.1 LINC01580:4
5.2 LINC01580:4