Transcript: LINC01578:5

Basic information

LNCipedia transcript ID: LINC01578:5 
LNCipedia gene ID: LINC01578
RefSeq ID: NR_037600
Location (hg38): chr15:92882843-92898747
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1593 bp
Exons: 5
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_037600; NR_037600.1
Alternative gene names: ; LINC01578


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score -73.9776 non-coding 
CPAT coding probability 1.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01578:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CHD2-6:4
4.0 LINC01578:5
4.1 LINC01578:5
5.0 LINC01578:5
5.1 LINC01578:5
5.2 LINC01578:5