Transcript: LINC01569:18

Basic information

LNCipedia transcript ID: LINC01569:18 
LNCipedia gene ID: LINC01569
Location (hg38): chr16:4245966-4251417
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1192 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00024951
Alternative gene names: XLOC_011867; linc-SRL; TCONS_00024567


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.2849 non-coding 
CPAT coding probability 1.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01569:18 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TFAP4-1:9
3.1 lnc-SRL-2:11
4.0 LINC01569:18
4.1 LINC01569:18
5.0 LINC01569:18
5.1 LINC01569:18
5.2 LINC01569:18