Transcript: LINC01550:2

Basic information

LNCipedia transcript ID: LINC01550:2 
LNCipedia gene ID: LINC01550
Ensembl Gene ID: ENSG00000259097
Ensembl Transcript ID: ENST00000555776
Location (hg38): chr14:98068240-98205143
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 542 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000555776.1; RP11-61O1.1-001; OTTHUMT00000413589.1; NONHSAT039591
Alternative gene names: ENSG00000259097.1; RP11-61O1.1; OTTHUMG00000171471.1; ; AL163932.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -127.421 non-coding 
CPAT coding probability 0.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01550:2 no no no no

Available literature

  1. Yu (2015), Glucocorticoids Significantly Influence the Transcriptome of Bone Microvascular Endothelial Cells of Human Femoral Head., Chin. Med. J.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C14orf64-1:1
4.0 LINC01550:2
4.1 LINC01550:2
5.0 LINC01550:2
5.1 LINC01550:2
5.2 LINC01550:2