Transcript: LINC01543:2

Basic information

LNCipedia transcript ID: LINC01543:2 
LNCipedia gene ID: LINC01543
RefSeq ID: NR_110762
Location (hg38): chr18:26422995-26438044
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 770 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110762; NR_110762.1
Alternative gene names: TCONS_00026302; LINC01543


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -146.6259 non-coding 
CPAT coding probability 14.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01543:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TAF4B-1:4
4.0 LINC01543:2
4.1 LINC01543:2
5.0 LINC01543:2
5.1 LINC01543:2
5.2 LINC01543:2