Transcript: LINC01534:9

Basic information

LNCipedia transcript ID: LINC01534:9 
HGNC Gene Symbol: LINC01534    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1534
Ensembl Gene ID: ENSG00000225975
Ensembl Transcript ID: ENST00000425254
Location (hg38): chr19:36685465-36687410
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 815 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000425254.2
Alternative gene names: ENSG00000225975.2; AC074138.3; ENSG00000225975.6; LINC01534;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -113.2054 non-coding 
CPAT coding probability 1.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01534:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF461-1:6
4.0 LINC01534:9
4.1 LINC01534:9
5.0 LINC01534:9
5.1 LINC01534:9
5.2 LINC01534:9