Transcript: LINC01515:28

Basic information

LNCipedia transcript ID: LINC01515:28 
HGNC Gene Symbol: LINC01515    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1515
Ensembl Gene ID: ENSG00000228065
Ensembl Transcript ID: ENST00000596743
Location (hg38): chr10:65615734-65616189
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 456 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT013652; ENST00000596743.1
Alternative gene names: ENSG00000228065.6; RP11-222A11.1; ENSG00000228065.10; LINC01515;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -777.6355 non-coding 
CPAT coding probability 0.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01515:28 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LRRTM3-1:20
4.0 LINC01515:28
4.1 LINC01515:28
5.0 LINC01515:28
5.1 LINC01515:28
5.2 LINC01515:28