Transcript: LINC01511:3

Basic information

LNCipedia transcript ID: LINC01511:3 
HGNC Gene Symbol: LINC01511    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1511
Ensembl Gene ID: ENSG00000250584
Ensembl Transcript ID: ENST00000523692
Location (hg38): chr5:1363626-1380048
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1450 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000523692.1; RP11-325I22.2-003; OTTHUMT00000374785.1
Alternative gene names: ENSG00000250584.2; RP11-325I22.2; OTTHUMG00000161736.2; LINC01511


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 19.7269 non-coding 
CPAT coding probability 15.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01511:3 no no no no

Available literature

  1. Wang (2014), LncRNA expression profiles of EGFR exon 19 deletions in lung adenocarcinoma ascertained by using microarray analysis., Med. Oncol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CLPTM1L-1:2
4.0 LINC01511:3
4.1 LINC01511:3
5.0 LINC01511:3
5.1 LINC01511:3
5.2 LINC01511:3