Transcript: LINC01510:7

Basic information

LNCipedia transcript ID: LINC01510:7 
LNCipedia gene ID: LINC01510
Ensembl Gene ID: ENSG00000243220
Ensembl Transcript ID: ENST00000421965
Location (hg38): chr7:116563594-116571234
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 692 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000421965.1; AC006159.4-001; OTTHUMT00000141439.2; NONHSAT122899
Alternative gene names: ENSG00000243220.1; AC006159.4; OTTHUMG00000066048.2; ; AC006159.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -112.8293 non-coding 
CPAT coding probability 3.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01510:7 no no no no

Available literature

  1. Cen (2018), Long noncoding RNA LINC01510 promotes the growth of colorectal cancer cells by modulating MET expression., Cancer Cell Int.
  2. Malouf (2015), Characterization of long non-coding RNA transcriptome in clear-cell renal cell carcinoma by next-generation deep sequencing., Mol Oncol


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC106873.4.1-2:4
4.0 LINC01510:7
4.1 LINC01510:7
5.0 LINC01510:7
5.1 LINC01510:7
5.2 LINC01510:7