Transcript: LINC01508:4

Basic information

LNCipedia transcript ID: LINC01508:4 
HGNC Gene Symbol: LINC01508    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1508
Ensembl Gene ID: ENSG00000231107
Ensembl Transcript ID: ENST00000425666
Location (hg38): chr9:90300902-90433489
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1013 bp
Exons: 3
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00015842; ENST00000425666; ENST00000425666.1; RP11-389K14.3-001; OTTHUMT00000053009.1; NONHSAT132998
Alternative gene names: XLOC_007769; linc-SEMA4D-3; ENSG00000231107; RP11-389K14.3; ENSG00000231107.1; OTTHUMG00000020194.1; LINC01508;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -34.4995 non-coding 
CPAT coding probability 8.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01508:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DIRAS2-3:2
3.1 lnc-DIRAS2-2:2
4.0 LINC01508:4
4.1 LINC01508:4
5.0 LINC01508:4
5.1 LINC01508:4
5.2 LINC01508:4