Transcript: LINC01492:5

Basic information

LNCipedia transcript ID: LINC01492:5 
HGNC Gene Symbol: LINC01492    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1492
Ensembl Gene ID: ENSG00000225564
Ensembl Transcript ID: ENST00000425157
Location (hg38): chr9:103207173-103253266
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 659 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT133774; ENST00000425157.2
Alternative gene names: ENSG00000225564.2; RP11-341A22.2; ENSG00000225564.6; LINC01492;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -78.0312 non-coding 
CPAT coding probability 6.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01492:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OR13C4-4:4
4.0 LINC01492:5
4.1 LINC01492:5
5.0 LINC01492:5
5.1 LINC01492:5
5.2 LINC01492:5