Transcript: LINC01483:10

Basic information

LNCipedia transcript ID: LINC01483:10 
HGNC Gene Symbol: LINC01483    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1483
Ensembl Gene ID: ENSG00000227517
Ensembl Transcript ID: ENST00000587241
Location (hg38): chr17:69763677-69903000
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 565 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT055600; ENST00000587241.1
Alternative gene names: ENSG00000227517.2; AC003051.1; ENSG00000227517.6; LINC01483;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -148.5333 non-coding 
CPAT coding probability 1.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01483:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MAP2K6-1:9
4.0 LINC01483:10
4.1 LINC01483:10
5.0 LINC01483:10
5.1 LINC01483:10
5.2 LINC01483:10