Transcript: LINC01478:9

Basic information

LNCipedia transcript ID: LINC01478:9 
LNCipedia gene ID: LINC01478
Location (hg38): chr18:44280786-44291718
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 470 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00026505; NONHSAT059083
Alternative gene names: XLOC_012830; linc-SYT4-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -32.6866 non-coding 
CPAT coding probability 0.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01478:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SYT4-1:2
3.1 lnc-SYT4-1:2
4.0 LINC01478:9
4.1 LINC01478:9
5.0 LINC01478:9
5.1 LINC01478:9
5.2 LINC01478:9