Transcript: LINC01470:3

Basic information

LNCipedia transcript ID: LINC01470:3 
HGNC Gene Symbol: LINC01470    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1470
Ensembl Gene ID: ENSG00000249484
Ensembl Transcript ID: ENST00000584829
Location (hg38): chr5:152938838-152973203
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 681 bp
Exons: 6
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000584829.1; AC091969.1-006; OTTHUMT00000444730.1; NONHSAT104659
Alternative gene names: ENSG00000249484.4; AC091969.1; OTTHUMG00000163486.3; ENSG00000249484.8; LINC01470;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -189.1408 non-coding 
CPAT coding probability 9.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01470:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NMUR2-1:3
4.0 LINC01470:3
4.1 LINC01470:3
5.0 LINC01470:3
5.1 LINC01470:3
5.2 LINC01470:3