Transcript: LINC01449:2

Basic information

LNCipedia transcript ID: LINC01449:2 
HGNC Gene Symbol: LINC01449    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1449
Ensembl Gene ID: ENSG00000224017
Ensembl Transcript ID: ENST00000440213
Location (hg38): chr7:41101604-41133507
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1220 bp
Exons: 6
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00012998; ENST00000440213; ENST00000440213.1; AC005022.1-001; OTTHUMT00000338454.1
Alternative gene names: XLOC_006059; linc-MRPL32-4; ENSG00000224017; AC005022.1; ENSG00000224017.1; OTTHUMG00000155115.1; LINC01449;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -12.2705 non-coding 
CPAT coding probability 14.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01449:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C7orf10-1:2
3.1 lnc-C7orf10-1:2
4.0 LINC01449:2
4.1 LINC01449:2
5.0 LINC01449:2
5.1 LINC01449:2
5.2 LINC01449:2