Transcript: LINC01448:1

Basic information

LNCipedia transcript ID: LINC01448:1 
HGNC Gene Symbol: LINC01448    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1448
Ensembl Gene ID: ENSG00000238284
Ensembl Transcript ID: ENST00000455947
RefSeq ID: NR_110833
Location (hg38): chr7:42661726-42706447
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1171 bp
Exons: 3
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000455947; ENST00000455947.1; AC027269.2-001; OTTHUMT00000338493.1; NONHSAT120273; NR_110833.1
Alternative gene names: ENSG00000238284; AC027269.2; ENSG00000238284.1; OTTHUMG00000155126.1; LINC01448;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.5118 non-coding 
CPAT coding probability 0.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01448:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-111K18.1.1-2:1
3.1 lnc-RP11-111K18.1.1-3:1
4.0 LINC01448:1
4.1 LINC01448:1
5.0 LINC01448:1
5.1 LINC01448:1
5.2 LINC01448:1