Transcript: LINC01428:5

Basic information

LNCipedia transcript ID: LINC01428:5 
LNCipedia gene ID: LINC01428
Location (hg38): chr20:7146146-7148098
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 600 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00028312; NONHSAT078536
Alternative gene names: XLOC_013647; linc-FERMT1-3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -199.663 non-coding 
CPAT coding probability 0.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01428:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-HAO1-1:4
3.1 lnc-HAO1-2:4
4.0 LINC01428:5
4.1 LINC01428:5
5.0 LINC01428:5
5.1 LINC01428:5
5.2 LINC01428:5