Transcript: LINC01376:2

Basic information

LNCipedia transcript ID: LINC01376:2 
HGNC Gene Symbol: LINC01376    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1376
Ensembl Gene ID: ENSG00000236204
Ensembl Transcript ID: ENST00000449124
Location (hg38): chr2:19044866-19346748
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 626 bp
Exons: 5
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000449124; ENST00000449124.1; AC092594.1-003; OTTHUMT00000323836.1; NONHSAT069385
Alternative gene names: ENSG00000236204; AC092594.1; ENSG00000236204.1; OTTHUMG00000151766.2; ENSG00000236204.5; LINC01376;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -52.9771 non-coding 
CPAT coding probability 7.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01376:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-OSR1-3:1
3.1 lnc-OSR1-3:1
4.0 LINC01376:2
4.1 LINC01376:2
5.0 LINC01376:2
5.1 LINC01376:2
5.2 LINC01376:2