Transcript: LINC01374:15

Basic information

LNCipedia transcript ID: LINC01374:15 
LNCipedia gene ID: LINC01374
Location (hg38): chr10:89853807-89914955
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 521 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00018278; NONHSAT015575
Alternative gene names: XLOC_008554; linc-RPP30-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -261.1911 non-coding 
CPAT coding probability 1.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01374:15 no no no no

Available literature

  1. Liu (2014), LncRNAs expression signatures of hepatocellular carcinoma revealed by microarray., World J. Gastroenterol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KIF20B-3:2
3.1 lnc-KIF20B-4:2
4.0 lnc-KIF20B-4:2
4.1 lnc-KIF20B-4:2
5.0 lnc-KIF20B-4:2
5.1 LINC01374:3
5.2 LINC01374:15