Transcript: LINC01365:5

Basic information

LNCipedia transcript ID: LINC01365:5 
HGNC Gene Symbol: LINC01365    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1365
Ensembl Gene ID: ENSG00000250772
Ensembl Transcript ID: ENST00000512219
Location (hg38): chr4:119799096-119804500
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 637 bp
Exons: 5
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00007818; ENST00000512219; ENST00000512219.1; RP11-236P13.1-002; OTTHUMT00000364583.1; NONHSAT098104
Alternative gene names: XLOC_004058; linc-PDE5A-1; ENSG00000250772; RP11-236P13.1; ENSG00000250772.1; OTTHUMG00000161337.2; ENSG00000250772.5; LINC01365;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -93.7053 non-coding 
CPAT coding probability 9.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01365:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PDE5A-2:5
3.1 lnc-PDE5A-2:5
4.0 LINC01365:5
4.1 LINC01365:5
5.0 LINC01365:5
5.1 LINC01365:5
5.2 LINC01365:5