Transcript: LINC01356:5

Basic information

LNCipedia transcript ID: LINC01356:5 
LNCipedia gene ID: LINC01356
Location (hg38): chr1:112820290-112849779
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 704 bp
Exons: 5
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: TCONS_00000605; ENST00000449572; ENST00000449572.1; RP11-426L16.8-003; OTTHUMT00000033532.1; NONHSAT005287
Alternative gene names: XLOC_000966; linc-PPM1J; ENSG00000215866; RP11-426L16.8; ENSG00000215866.2; OTTHUMG00000012022.2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 29.1222 non-coding 
CPAT coding probability 6.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01356:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SLC16A1-1:3
3.1 lnc-SLC16A1-1:3
4.0 LINC01356:5
4.1 LINC01356:5
5.0 LINC01356:5
5.1 LINC01356:5
5.2 LINC01356:5