Transcript: LINC01351:15

Basic information

LNCipedia transcript ID: LINC01351:15 
HGNC Gene Symbol: LINC01351    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1351
Ensembl Gene ID: ENSG00000237457
Ensembl Transcript ID: ENST00000424735
Location (hg38): chr1:190479006-190480735
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 526 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00000357; ENST00000424735; ENST00000424735.1; RP11-547I7.2-001; OTTHUMT00000086283.1; NONHSAT008506
Alternative gene names: XLOC_000505; linc-RGS18-3; ENSG00000237457; RP11-547I7.2; ENSG00000237457.2; OTTHUMG00000035535.1; ENSG00000237457.6; LINC01351;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -40.7971 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01351:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RGS18-3:8
3.1 lnc-RGS18-5:8
4.0 LINC01351:15
4.1 LINC01351:15
5.0 LINC01351:15
5.1 LINC01351:15
5.2 LINC01351:15