Transcript: LINC01285:3

Basic information

LNCipedia transcript ID: LINC01285:3 
LNCipedia gene ID: LINC01285
Location (hg38): chrX:118839556-118857743
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2146 bp
Exons: 7
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00016936; NONHSAT138304
Alternative gene names: XLOC_008051; linc-LONRF3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -15.8631 non-coding 
CPAT coding probability 22.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01285:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZCCHC12-1:2
3.1 lnc-ZCCHC12-1:2
4.0 LINC01285:3
4.1 LINC01285:3
5.0 LINC01285:3
5.1 LINC01285:3
5.2 LINC01285:3