Transcript: LINC01273:13

Basic information

LNCipedia transcript ID: LINC01273:13 
HGNC Gene Symbol: LINC01273    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1273
Ensembl Gene ID: ENSG00000231742
Ensembl Transcript ID: ENST00000411453
Location (hg38): chr20:50172590-50176671
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 685 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000411453.2
Alternative gene names: ENSG00000231742.5; LINC01273;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 11.4452 non-coding 
CPAT coding probability 4.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01273:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 LINC01273:13
4.1 LINC01273:13
5.0 LINC01273:13
5.1 LINC01273:13
5.2 LINC01273:13