Transcript: LINC01257:1

Basic information

LNCipedia transcript ID: LINC01257:1 
LNCipedia gene ID: LINC01257
Location (hg38): chr12:131164458-131217586
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1900 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020657; NONHSAT032002
Alternative gene names: XLOC_009957; linc-SFSWAP-3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.9494 non-coding 
CPAT coding probability 12.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01257:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GPR133-1:1
3.1 lnc-GPR133-1:1
4.0 LINC01257:1
4.1 LINC01257:1
5.0 LINC01257:1
5.1 LINC01257:1
5.2 LINC01257:1